Get CV to remove

get_CV_to_remove() returns metabolite names having more CV value than the given threshold.

Usage

get_CV_to_remove(dat, threshold)

Arguments

dat

a raw_data object. Output of read_data() function.

threshold

a decimal specifying the minimum CV a metabolite must have to be removed.

Examples

path <- get_example_data("small_biocrates_example.xls")
dat <- read_data(path)
dat <- complete_data(dat, "limit", "limit", "limit")
#> Completing 109 < LOD values...
#> Completing 6 < LLOQ values...
#> Completing 9 < ULOQ values...
dat <- calculate_CV(dat)
get_CV_to_remove(dat, 0.3)
#> [1] "C3"   "C4"   "C4:1" "C5"