All functions

add_motifs()

Motif to a sequence injection

contains_motif()

Simple motifs check

count_seq_kmers()

Counting kmers

filter_chisq()

Chi-squared independence test

filter_fcbf()

Fast Correlation Based Filter

filter_ic()

Stepwise information criteria based filtering

filter_ig()

Entropy-Based Feature Selection Algorithms

filter_praznik()

Entropy-Based Feature Selection Algorithms

filter_quipt()

QuiPT - Quick Permutation Test

generate_kmer_data()

K-mer data generation

generate_motif()

Random motifs generator

generate_motifs()

Function generates list of motifs

generate_negative_sequence()

Sampling from alphabet

generate_sequence_data()

Sequences generation

get_target_additive()

Logistic regression response

get_target_interactions()

Logistic regression with interactions

get_target_logic()

Logic regression noise

kmerFilters

kmerFilters

list_filters()

Get a list of filtering methods

rbinom_vec()

Binomial sampling

sparse_cor()

Sparse correlation

validate_motifs()

Validate if given set of motifs can occur in a sequence at the same time