Conferences & workshops

BioGenies at scientific conferences, workshops and training schools: event editions, attendees, talks and posters.

Sharing our work. Bringing ideas home.

Explore the meetings, workshops and training schools attended by our team, former members and collaborators. Each event appears once, with the attendees together; open its contributions to explore individual talks and posters.

Meet the people · Read our publications · Latest group news

2026-09-16 – 2026-09-18

Symposium of the Polish Bioinformatics Society

Poznań, Poland

Attended by Michał Burdukiewicz Valentín Iglesias Krystyna (Krysia) Grzesiak Mariia Rutkowska

Talks, posters & participation (4)

• Michał Burdukiewicz · Talk

  European AI Act and biomedical data: more paperwork or more governance?

• Valentín Iglesias · Talk

  The AmyloGraph amyloid-antibody database: data acquisition, curation, extraction for amyloid-antibody interactions

• Krystyna (Krysia) Grzesiak · Talk

  Iscores: proper scoring rules for evaluating missing-value imputation methods

• Mariia Rutkowska · Talk

  TickPacket

2026-02-17 – 2026-02-20

Non-globular proteins in the era of Machine Learning Training School

Seville, Spain

Attended by Jarosław (Jarek) Chilimoniuk Julia Szkóp

Talks, posters & participation (2)

• Jarosław (Jarek) Chilimoniuk · Training

  Introduction to Machine learning for Non-globular proteins

• Julia Szkóp · Training

  Introduction to Machine learning for Non-globular proteins

Event

2025-09-24 – 2025-09-26

Functional Amyloid Meeting

Hamburg, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Aggregating amyloid resources

2025-09-15 – 2025-09-17

Symposium of the Polish Bioinformatics Society

Białystok, Poland

Attended by Michał Burdukiewicz Jarosław (Jarek) Chilimoniuk Valentín Iglesias Mariia Rutkowska Joanna (Asia) Pokora

Talks, posters & participation (5)

• Michał Burdukiewicz · Talk

  DeepSkim: Towards Automated Assessment of Publication Content

• Jarosław (Jarek) Chilimoniuk · Poster

  Aggregating amyloid resources: comprehensive list of amyloid-like aggregation databases

• Valentín Iglesias · Talk

  A4D Antibody Aggregation Database (A4D-ABDB): identifying and optimizing aggregation propensity for ttherapeutic antibodies

• Mariia Rutkowska · Poster

  Development of AmyloGraph Antibody database

• Joanna (Asia) Pokora · Poster

  MetaboCrates: An open-source pipeline for quality-aware analysis of targeted metabolomics data

Event

2025-09-15 – 2025-09-21

Konferencja Zastosowań Matematyki

Kościelisko, Poland

Attended by Krystyna (Krysia) Grzesiak

Talks, posters & participation (1)

• Krystyna (Krysia) Grzesiak · Poster

  imputomics: how to impute metabolomics data

2025-06-22 – 2025-06-26

Metabolomics

Prague, Czech Republic

Attended by Michał Burdukiewicz Krystyna (Krysia) Grzesiak Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (3)

• Michał Burdukiewicz · Poster

  MetaboCrates: An open-source pipeline for quality-aware analysis of targeted metabolomics data

• Krystyna (Krysia) Grzesiak · Poster

  Leveraging SLOPE Regularization for Variable Clustering in Metabolomics

• Jarosław (Jarek) Chilimoniuk · Poster

  imputomics evolved: expanding imputation methods and redesigning benchmarks for missing data imputation

2025-05-20 – 2025-05-23

Meeting on Non-globular proteins in the era of Machine Learning

Vilnius, Lithuania

Attended by Jarosław (Jarek) Chilimoniuk Valentín Iglesias Mariia Rutkowska Michał Burdukiewicz Oriol Bárcenas

Talks, posters & participation (5)

• Jarosław (Jarek) Chilimoniuk · Poster

  Aggregating amyloid resources

• Valentín Iglesias · Poster

  Liquid-liquid phase separation (LLPS) as a sensing and adaptation mechanism: An evidence-based hypothesis on AP2 transcription factors in the malaria parasite

• Mariia Rutkowska · Poster

  Development of AmyloGraph Antibody database

• Michał Burdukiewicz · Poster

  Comprehensive protein datasets and benchmarking for liquid-liquid phase separation

• Oriol Bárcenas · Talk

  StriFi: Comprehensive database of Fibril Structures

2024-10-20 – 2024-10-24

Human Proteome Organisation World Congress

Dresden, Germany

Attended by Weronika Puchała Jarosław (Jarek) Chilimoniuk Krystyna (Krysia) Grzesiak Oriol Bárcenas Michał Burdukiewicz

Talks, posters & participation (5)

• Weronika Puchała · Poster

  hadexversum: tools for HDX-MS analysis

• Jarosław (Jarek) Chilimoniuk · Poster

  imputomics 2.0: bridging data gaps in proteomics with missing value imputation algorithms and their benchmark

• Krystyna (Krysia) Grzesiak · Poster

  Feature screening and model regularization for k-mer representations of biological sequences

• Oriol Bárcenas · Poster

  Aggrescan4D: structure-informed analysis of pH-dependent protein aggregation

• Michał Burdukiewicz · Poster

  Confident protein datasets for liquid-liquid phase separation studies

Earlier events (82)

2024 4

2024-09-11 – 2024-09-13

Symposium of the Polish Bioinformatics Society

Warsaw, Poland

Attended by Michał Burdukiewicz Jarosław (Jarek) Chilimoniuk Weronika Puchała Krystyna (Krysia) Grzesiak Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (5)

• Michał Burdukiewicz · Poster

  Confident datasets of client, driver and negative proteins in liquid-liquid phase separation

• Jarosław (Jarek) Chilimoniuk · Poster

  imputomics 2.0: comprehensive R package for missing data imputation in proteomics data

• Weronika Puchała · Poster

  hadexversum: HDX-MS analysis made easy

• Krystyna (Krysia) Grzesiak · Poster

  Feature screening and model regularization for k-mer representations of biological sequences

• Katarzyna (Kasia) Sidorczuk · Talk

  Strain-resolved metagenomics in analysis of gut microbiota dynamics within families

2024-07-12 – 2024-07-16

Intelligent Systems For Molecular Biology

Montreal, Canada

Attended by Krystyna (Krysia) Grzesiak Weronika Puchała

Talks, posters & participation (2)

• Krystyna (Krysia) Grzesiak · Poster

  imputomics: web server and R package for missing values imputation in metabolomics data

• Weronika Puchała · Poster

  hadexversum: the family of HDX-MS tools

2024-06-16 – 2024-06-20

Metabolomics

Osaka, Japan

Attended by Krystyna (Krysia) Grzesiak

Talks, posters & participation (1)

• Krystyna (Krysia) Grzesiak · Poster

  Imputomics: Simplifying Metabolomics Data Imputation with All-in-One Access

2024-05-14 – 2024-05-17

Meeting on Non-globular proteins in the era of Machine Learning

Thessaloniki, Greece

Attended by Jarosław (Jarek) Chilimoniuk Michał Burdukiewicz Valentín Iglesias

Talks, posters & participation (3)

• Jarosław (Jarek) Chilimoniuk · Poster

  imputomics 2.0: comprehensive R package for missing data imputation in proteomics data

• Michał Burdukiewicz · Poster

  Confident dataset generation for the specific prediction and benchmarking of client, driver and negative proteins in liquid-liquid phase separation

• Valentín Iglesias · Poster

  A3D Model Organism Database (A3D-MODB): a database for proteome aggregation predictions in model organisms.

2023 7

SCB

2023-12-15 – 2023-12-16

Symposium of Bioinformatics and Genomics

Barcelona, Spain

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Talk

  A3D Model Organism Database (A3D-MODB): a database for proteome aggregation predictions in model organisms.

PhasAge

2023-10-18 – 2023-10-20

PhasAGE international conference

Porto, Portugal

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Poster

  A3D Model Organism Database (A3D-MODB): a database for proteome aggregation predictions in model organisms.

IBID

2023-10-17 – 2023-10-19

International Biotech Innovation Days

Senftenberg, Germany

Attended by Jarosław (Jarek) Chilimoniuk Michał Burdukiewicz

Talks, posters & participation (2)

• Jarosław (Jarek) Chilimoniuk · Talk

  Imputomics: comprehensive R package for missing data imputation in metabolomics data

• Michał Burdukiewicz · Keynote

  AmyloGraph: mapping the landscape of amyloid-amyloid interactions

CASUS

2023-10-11

Center for Advanced Systems Understanding workshops

Wrocław, Poland

Attended by Krystyna (Krysia) Grzesiak

Talks, posters & participation (1)

• Krystyna (Krysia) Grzesiak · Talk

  Imputomics: comprehensive missing value imputation for metabolomics data

2023-07-05 – 2023-07-07

Meeting on Non-globular proteins in the era of Machine Learning

Bratislava, Slovakia

Attended by Valentín Iglesias Michał Burdukiewicz

Talks, posters & participation (2)

• Valentín Iglesias · Talk

  Incorporating protein microenvironmental influence on protein compaction prediction.

• Michał Burdukiewicz · Talk

  AmyloGraph: A comprehensive database of amyloid-amyloid interactions

PhasAge

2023-04-17 – 2023-04-21

PhasAGE training school

Porto, Portugal

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Training

  Protein aggregation, intrinsic disorder and phase separation in the era of machine learning

MetCircle

2023-01-27 – 2023-01-28

Metabolomics Circle

Wrocław, Poland

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Talk

  Imputomics: imputation of missing values for ‘omics’ dat

2022 10

2022-12-04 – 2022-12-08

Human Proteome Organisation World Congress

Cancún, Mexico

Attended by Weronika Puchała

Talks, posters & participation (1)

• Weronika Puchała · Poster

DAaC

2022-11-24

Hasso Plattner Institute, University of Potsdam

Potsdam, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Sampling of negative datasets

CBaB

2022-11-16

Faculty of Mathematics, Informatics, and Mechanics, University of Warsaw

Warsaw, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  The impact of negative data sampling on antimicrobial peptide prediction

ARgs

2022-11-11

Institute of Biotechnology, Vilnius University

Vilnius, Lithuania

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Pitfalls of machine learning for peptide analysis

Ptas

2022-10-27

Faculty of Mathematics and Computer Science, University of Wrocław

Wrocław, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Pułapki w analizie danych peptydowych

CASUS

2022-10-06 – 2022-10-07

Center for Advanced Systems Understanding workshops

Wrocław, Poland

Attended by Krystyna (Krysia) Grzesiak

Talks, posters & participation (1)

• Krystyna (Krysia) Grzesiak · Talk

  A novel semiparametric model for hydrogen deuterium exchange monitored by mass spectrometry data

ECCB

2022-09-18 – 2022-09-21

European Conference on Computational Biology

Sitges, Spain

Attended by Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (1)

• Katarzyna (Kasia) Sidorczuk ·

  Where do they come from, where do they go? Prediction of protein subplastid localization and origin with PlastoGram

ESCS

2022-09-18

European Student Council Symposium

Sitges, Spain

Attended by Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (1)

• Katarzyna (Kasia) Sidorczuk ·

  Where do they come from, where do they go? Prediction of protein subplastid localization and origin with PlastoGram

GCB

2022-09-06 – 2022-09-08

German Conference on Bioinformatics

Halle (Salle), Germany

Attended by Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (1)

• Katarzyna (Kasia) Sidorczuk ·

  Where do they come from, where do they go? PlastoGram: a stacked model for prediction of protein subplastid localization and origin

CASUSCON

2022-07-11 – 2022-07-15

UWr-HZDR-CASUS International Conference on Advanced Systems Research CASUSCON

Wrocław, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Differentation anticancer from antimicrobial pepides using Cancergram

2021 4

EYSF

2021-10-21 – 2021-10-22

EMBO Young Scientists' Forum (EYSF)

Warsaw, Poland

Attended by Michał Burdukiewicz Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (2)

• Michał Burdukiewicz · Poster

  The impact of negative data sampling on antimicrobial peptides prediction

• Katarzyna (Kasia) Sidorczuk · Poster

  CancerGram: How to differentiate anticancer from antimicrobial peptides?

GCB

2021-09-06 – 2021-09-09

German Conference on Bioinformatics

online, Online

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  The impact of negative data sampling on antimicrobial peptide prediction

PCBBE

2021-05-19 – 2021-05-21

Polish Conference on Biocybernetics and Biomedical Engineering

Warsaw, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Negative data set sampling as the source of bias in prediction of antimicrobial peptides

GfV

2021-03-24 – 2021-03-26

Meeting of the Society for Virology

online, Online

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  AntiViroGram - proteome-wide prediction of antiviral peptide precursors

2020 4

IBID

2020-10-28 – 2020-10-29

International Biotech Innovation Days

Senftenberg, Germany

Attended by Jarosław (Jarek) Chilimoniuk Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (2)

• Jarosław (Jarek) Chilimoniuk · Talk

  countfitteR: count data analysis for precision medicine

• Katarzyna (Kasia) Sidorczuk · Poster

  Prediction of antimicrobial peptides with AmpGram

DSS

2020-10-16

Data Science Summit

Warsaw, Poland

Attended by Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (1)

• Katarzyna (Kasia) Sidorczuk ·

  Reproducible analytic workflows in R with drake and renv

2020-09-24 – 2020-09-27

Why R? Conference

Warszawa, Poland

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Talk

  Count data analysis with countfitteR

DGHM & VAAM

2020-03-08 – 2020-03-11

Joint Microbiology & Infection Conference of the German Society for Hygiene and Microbiology and the Association of General and Applied Microbiology

Leipzig, Germany

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Poster

  AmpGram – a novel tool for prediction of antimicrobial peptides

2019 13

SSP

2019-11-03 – 2019-11-06

Symposium on Structural Proteomics

Göttingen, Germany

Attended by Weronika Puchała

Talks, posters & participation (1)

• Weronika Puchała · Poster

  HaDeX: tool for analysis of HDX-MS data

SSP

2019-11-03 – 2019-11-06

Symposium on Structural Proteomics

Gottingen, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Just give me a p-value: statistical analysis of deuterium uptake curves in HDX-MS

2019-09-26 – 2019-09-29

Why R? Conference

Warszawa, Poland

Attended by Weronika Puchała Katarzyna (Kasia) Sidorczuk Jarosław (Jarek) Chilimoniuk Dominik Rafacz

Talks, posters & participation (4)

• Weronika Puchała · Talk

  R for experimentalists: HDX-MS example

• Katarzyna (Kasia) Sidorczuk · Talk

  PepBay: Implementation of Bayesian inference in the analysis of peptide arrays

• Jarosław (Jarek) Chilimoniuk · Talk

  AmyloGram: the R package and a Shiny server for amyloid prediction

• Dominik Rafacz · Talk

  AmyloGram 2.0: MBO in the prediction of amyloid proteins

2019-09-19 – 2019-09-21

Symposium of the Polish Bioinformatics Society

Cracow, Poland

Attended by Dominik Rafacz Michał Burdukiewicz Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (4)

• Dominik Rafacz · Poster

  AmyloGram 2.0: MBO in the prediction of amyloid proteins

• Dominik Rafacz · Talk

  AmyloGram 2.0: MBO in the prediction of amyloid proteins

• Michał Burdukiewicz · Talk

  Did the targeting signals for mitochondria and plastids evolve from antimicrobial peptides?

• Katarzyna (Kasia) Sidorczuk ·

  In silico identification and phylogeny of components responsible for protein import into thylakoids of Paulinella photosynthetic species

2019-09-19 – 2019-09-21

Symposium of the Polish Bioinformatics Society

Krakow, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  HaDeX: an R package and web-server for analysis of data from hydrogen-deuterium exchange mass spectrometry experiments

GCB

2019-09-17 – 2019-09-19

German Conference on Bioinformatics

Heidelberg, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  autobiogramML: towards automated machine learning in protein function prediction

IMSS

2019-09-15 – 2019-09-20

International Mass Spectrometry School

Sitges, Spain

Attended by Weronika Puchała

Talks, posters & participation (2)

• Weronika Puchała · Poster

  HaDeX - web-server for analysis of data from hydrogen-deuterium exchange-mass spectrometry experiments

• Weronika Puchała · Talk

  HaDeX - web-server for analysis of data from hydrogen-deuterium exchange-mass spectrometry experiments

EMBO | EMBL

2019-09-11 – 2019-09-13

Symposium: Multiomics to Mechanisms - Challenges in Data Integration

Heidelberg, Germany

Attended by Weronika Puchała

Talks, posters & participation (1)

• Weronika Puchała · Poster

  Analysis of data from hydrogen-deuterium exchange mass spectrometry experiments

2019-07-21 – 2019-07-25

Intelligent Systems For Molecular Biology and the European Conference on Computational Biology

Basel, Switzerland

Attended by Weronika Puchała

Talks, posters & participation (1)

• Weronika Puchała · Poster

  HaDeX - analysis of data from hydrogen-deuterium exchange-mass spectrometry experiments

SMBE

2019-07-21 – 2019-07-25

Meeting of the Society for Molecular Biology and Evolution

Manchester, United Kingdom

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Did the targeting signals for mitochondria and plastids evolve from ancient antimicrobial peptides?

SatRday

2019-05-17 – 2019-05-18

Conference for users of the R Language

Gdańsk, Poland

Attended by Weronika Puchała Katarzyna (Kasia) Sidorczuk Jarosław (Jarek) Chilimoniuk Dominik Rafacz Michał Burdukiewicz

Talks, posters & participation (5)

• Weronika Puchała · Talk

  HaDeX - analysis of HDX-MS data

• Katarzyna (Kasia) Sidorczuk · Talk

  Bayesian inference in big data analysis

• Jarosław (Jarek) Chilimoniuk · Talk

  AmyloGram: prediction of amyloid sequences in R

• Dominik Rafacz · Talk

  drake: reproducible workflow management in R

• Michał Burdukiewicz · Talk

  predPCR: an automated classification of qPCR curves

EuPA

2019-03-24 – 2019-03-28

Congress of the European Proteomic Association

Potsdam, Germany

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Poster

  AmyloGram: prediction of amyloid sequences in R

VAAM

2019-03-17 – 2019-03-19

Conference of the Association for General and Applied Microbiology

Mainz, Germany

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Poster

  Co-evolution of curli components CsgA and CsgB

2018 10

PL in ML

2018-12-14 – 2018-12-17

Polish View on Machine Learning

Warsaw, Poland

Attended by Katarzyna (Kasia) Sidorczuk Jarosław (Jarek) Chilimoniuk Michał Burdukiewicz

Talks, posters & participation (4)

• Katarzyna (Kasia) Sidorczuk · Poster

  PepBay: a Bayesian framework for analysis of peptide arrays

• Jarosław (Jarek) Chilimoniuk · Poster

  AmyloGram: prediction of amyloid sequences in R

• Michał Burdukiewicz · Poster

  PCRedux: machine learning helper tool for sigmoid curves

• Michał Burdukiewicz · Poster

  PCRedux: machine learning helper tool for sigmoid curves

ASM

2018-10-07 – 2018-10-11

American Society for Microbiology Conference on Biofilms

Washington DC, USA

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Poster

  CsgA, CsgB and CsgC - evolutionary Interplay in curli biogenesis

NGP-Net

2018-09-12 – 2018-09-14

NGP-Net Symposium on non-globular proteins

Druskininkai, Lithuania

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Talk

  Evaluation of mutational impact on prion-like proteins aggregation propensity.

2018-09-05 – 2018-09-07

Symposium of the Polish Bioinformatics Society

Wrocław, Poland

Attended by Jarosław (Jarek) Chilimoniuk Michał Burdukiewicz Katarzyna (Kasia) Sidorczuk

Talks, posters & participation (3)

• Jarosław (Jarek) Chilimoniuk · Talk

  PhyMet2: a database and toolkit for phylogenetic and metabolic analyses of methanogens

• Michał Burdukiewicz · Talk

  predPCR: automated classification of sigmoid curves

• Katarzyna (Kasia) Sidorczuk · Poster

  Two protein import pathways into the cyanobacteria-derived, photosynthetic organelles of Paulinella chromatophora

IBID

2018-05-23 – 2018-05-25

International Biotech Innovation Days

Senftenberg, Germany

Attended by Jarosław (Jarek) Chilimoniuk Katarzyna (Kasia) Sidorczuk Michał Burdukiewicz

Talks, posters & participation (3)

• Jarosław (Jarek) Chilimoniuk · Poster

  PhyMet2: database and algorithm predicting culturing conditions of methanogens

• Katarzyna (Kasia) Sidorczuk · Poster

  Protein import into the chromatophores of Paulinella photosynthetic species

• Michał Burdukiewicz · Workshops

  Introduction to basic R

MRCL

2018-05-01

University of Michigan

Michigan, USA

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Amyloid stretches in proteinous scaffolds of biofilms

VAAM

2018-04-15 – 2018-04-18

Conference of the Association for General and Applied Microbiology

Wolfsburg, Germany

Attended by Jarosław (Jarek) Chilimoniuk

Talks, posters & participation (1)

• Jarosław (Jarek) Chilimoniuk · Poster

  PhyMet2: complex database containing records on methanogens with unique feature (MethanoGram) allowing prediction of culture conditions based on 16S rRNA

NGP-Net

2018-04-09 – 2018-04-12

NGP-Net Symposium on non-globular proteins

Budapest, Hungary

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Training

SiL

2018-01-24

Interdisciplinary Nanoscience Center & Department of Molecular Biology and Genetics, Aarhus University

Aarhus, Denmark

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Challenges in the computational prediction of peptide amyloidogenicity

NGP-Net

2018-01-09 – 2018-01-12

NGP-Net Winter School on non-globular proteins

Nicossia, Cyprus

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Training

2017 7

SCB

2017-12-20

Symposium of Bioinformatics and Genomics

Barcelona, Spain

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Poster

  AMYCO: Evaluation of mutational impact on prion-like proteins aggregation propensity.

WBS

2017-10-09 – 2017-10-10

Wrocław Biofilm Symposium

Wrocław, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  Predicting properties of biological sequences using n-gram analysis

NGP-Net

2017-08-28 – 2017-09-01

NGP-Net Symposium on non-globular proteins

Košice, Slovakia

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  Challenges in the computational prediction of peptide amyloidogenicity

2017-07-21 – 2017-07-25

Intelligent Systems For Molecular Biology and the European Conference on Computational Biology

Prague, Czech Republic

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Computational and experimental validation of amyloid databases

useR!

2017-07-04 – 2017-07-07

useR!

Brussels, Belgium

Attended by Michał Burdukiewicz

Talks, posters & participation (2)

• Michał Burdukiewicz · Poster

  AmyloGram: prediction of amyloid sequences in R

• Michał Burdukiewicz · Poster

  Integrated analysis of digital PCR experiments in R

IA„A

2017-05-25

Brandenburg University of Technology Cottbus-Senftenberg

Senftenberg, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Modelling amyloidogenic scaffolds of biofilms

qPCR dPCR & NGS

2017-04-03 – 2017-04-05

qPCR dPCR & NGS

Freising, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  dpcReport: web server and software suite for unified analysis of digital PCRs and digital assays

2016 12

SCB

2016-12-20

Symposium of Bioinformatics and Genomics

Barcelona, Spain

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Poster

  PrionW: a server to identify proteins containing glutamine/asparagine rich prion-like domains and their amyloid cores.

eRum

2016-10-12 – 2016-10-14

European R Users Meeting

Poznań, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  N-gram analysis of biological sequences in R

2016-09-28 – 2016-09-30

Symposium of the Polish Bioinformatics Society

Białystok, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  SignalHsmm: prediction of malarial signal peptides

BIO

2016-09-13 – 2016-09-16

Congress of the Polish Biochemistry, Cell Biology, Biophysics and Bioinformatics

Wrocław, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  AmyloGram: analysis and prediction of amyloids using n-grams

GCB

2016-09-12 – 2016-09-15

German Conference on Bioinformatics

Berlin, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  Prediction of malarial signal peptides

ECCB

2016-09-03 – 2016-09-07

European Conference on Computational Biology

Hague, Netherlands

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  AmyloGram: a novel predictor of amyloidogenicity

ESCS

2016-09-03

European Student Council Symposium

Hague, Netherlands

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  AmyloGram: a novel predictor of amyloidogenicity

CHARME

2016-06-21 – 2016-06-22

CHARME of standardisation in life sciences

Warsaw, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Biogram: standardization of biological n-gram analysis in R

BIT

2016-06-16 – 2016-06-18

BioInformatics in Toruń

Toruń, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  AmyloGram: n-gram analysis of amyloids

IBID

2016-06-01 – 2016-06-02

Innovation Forum Senftenberg

Senftenberg, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (2)

• Michał Burdukiewicz · Poster

  dpcR: web server and R package for analysis of digital PCR experiments

• Michał Burdukiewicz · Talk

  biogram: a toolkit for biological n-gram analysis

NGP-Net

2016-02-15 – 2016-02-19

NGP-Net Winter School on non-globular proteins

Brixen, Italy

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Training

BIFI

2016-02-01 – 2016-02-03

International Conference BIFI 2016 on Molecular Recognition

Zaragoza, Spain

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Talk

  PrionW: a server to identify proteins containing glutamine/asparagine rich prion-like domains and their amyloid cores.

2015 5

Potsdam Days

2015-11-01 – 2015-11-02

Potsdam Days on Bioanalysis

Potsdam, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  dpcReport -- Mobile-Health analysis framework

GCB

2015-09-27 – 2015-09-30

German Conference on Bioinformatics

Dortmund, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  N-gram analysis of amyloid data

2015-09-17 – 2015-09-19

Symposium of the Polish Bioinformatics Society

Lublin, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  biogram: a toolkit for n-gram analysis

RECOMB

2015-04-12 – 2015-04-15

International Conference on Research in Computational Molecular Biology

Warsaw, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Predicting eukaryotic signal peptides using hidden Markov models

qPCR dPCR & NGS

2015-03-23 – 2015-03-27

qPCR dPCR & NGS

Freising-Weihenstephan, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (2)

• Michał Burdukiewicz · Poster

  The dpcR Package – a Framework for Analysis and Visualization of Digital PCR Experiments

• Michał Burdukiewicz · Poster

  Methods of Comparing Digital PCR Experiments

2014 4

IMB - Seminar

2014-10-09

Technical University Dresden

Dresden, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Keynote

  Prediction of eukaryotic signal peptides using hidden semi-Markov models

DGHM & VAAM

2014-10-05 – 2014-10-08

Joint Microbiology & Infection Conference of the German Society for Hygiene and Microbiology and the Association of General and Applied Microbiology

Dresden, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  Prevalence of Shiga toxin-producing, enterohemorrhagic and enteropathogenic Escherichia coli – a systematic review

BIO

2014-09-09 – 2014-09-12

Congress of the Polish Biochemistry, Cell Biology, Biophysics and Bioinformatics

Warsaw, Poland

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Talk

  Signal peptide prediction using hidden Markov models

qPCR dPCR & NGS

2014-09-09 – 2014-09-10

qPCR dPCR & NGS

Lyon, France

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Poster

  dpcR: an R package for the analysis of digital PCR

Undated 2

Event

ongoing

BioHackaton

Berlin, Germany

Attended by Michał Burdukiewicz

Talks, posters & participation (1)

• Michał Burdukiewicz · Workshops

Event

ongoing

4th BioHackaton

Wals, Germany

Attended by Valentín Iglesias

Talks, posters & participation (1)

• Valentín Iglesias · Workshops

  Data Extraction and Annotation of Amyloid-Antibody Interactions: What We Built, What We Broke, Where We Stand, and What We’ve Learned